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Waning 2-Dose and 3-Dose Effectiveness of mRNA Vaccines Against COVID-19–Associated Emergency Department and Urgent Care Encounters and Hospitalizations Among Adults During Periods of Delta and Omicron Variant Predominance — VISION Net - COVID-19

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Jill M. Ferdinands, PhD1; Suchitra Rao, MBBS2; Brian E. Dixon, PhD3,4; Patrick K. Mitchell, ScD5; Malini B. DeSilva, MD6; Stephanie A. Irving, MHS7; Ned Lewis, MPH8; Karthik Natarajan, PhD9,10; Edward Stenehjem, MD11; Shaun J. Grannis, MD3,12; Jungmi Han9; Charlene McEvoy, MD6; Toan C. Ong, PhD2; Allison L. Naleway, PhD7; Sarah E. Reese, PhD5; Peter J. Embi, MD3,12,13; Kristin Dascomb, MD11; Nicola P. Klein, MD8; Eric P. Griggs, MPH1; Deepika Konatham14; Anupam B. Kharbanda, MD15; Duck-Hye Yang, PhD5; William F. Fadel, PhD3,4; Nancy Grisel, MPP11; Kristin Goddard, MPH8; Palak Patel, MBBS1; I-Chia Liao, MPH14; Rebecca Birch, MPH5; Nimish R. Valvi, DrPH3; Sue Reynolds, PhD1; Julie Arndorfer, MPH11; Ousseny Zerbo, PhD8; Monica Dickerson1; Kempapura Murthy, MBBS14; Jeremiah Williams, MPH1; Catherine H. Bozio, PhD1; Lenee Blanton, MPH1; Jennifer R. Verani, MD1; Stephanie J. Schrag, DPhil1; Alexandra F. Dalton, PhD1; Mehiret H. Wondimu, MPH1; Ruth Link-Gelles, PhD1; Eduardo Azziz-Baumgartner, MD1; Michelle A. Barron, MD2; Manjusha Gaglani, MBBS14,16; Mark G. Thompson, PhD1; Bruce Fireman8 (View author affiliations)

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Summary

What is already known about this topic?

Protection against COVID-19 after 2 doses of mRNA vaccine wanes, but little is known about durability of protection after 3 doses.

What is added by this report?

Vaccine effectiveness (VE) against COVID-19–associated emergency department/urgent care (ED/UC) visits and hospitalizations was higher after the third dose than after the second dose but waned with time since vaccination. During the Omicron-predominant period, VE against COVID-19–associated ED/UC visits and hospitalizations was 87% and 91%, respectively, during the 2 months after a third dose and decreased to 66% and 78% by the fourth month after a third dose. Protection against hospitalizations exceeded that against ED/UC visits.

What are the implications for public health practice?

All eligible persons should remain up to date with recommended COVID-19 vaccinations to best protect against COVID-19–associated hospitalizations and ED/UC visits.

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CDC recommends that all persons aged ≥12 years receive a booster dose of COVID-19 mRNA vaccine ≥5 months after completion of a primary mRNA vaccination series and that immunocompromised persons receive a third primary dose.* Waning of vaccine protection after 2 doses of mRNA vaccine has been observed during the period of the SARS-CoV-2 B.1.617.2 (Delta) variant predominance (15), but little is known about durability of protection after 3 doses during periods of Delta or SARS-CoV-2 B.1.1.529 (Omicron) variant predominance. A test-negative case-control study design using data from eight VISION Network sites§ examined vaccine effectiveness (VE) against COVID-19 emergency department/urgent care (ED/UC) visits and hospitalizations among U.S. adults aged ≥18 years at various time points after receipt of a second or third vaccine dose during two periods: Delta variant predominance and Omicron variant predominance (i.e., periods when each variant accounted for ≥50% of sequenced isolates). Persons categorized as having received 3 doses included those who received a third dose in a primary series or a booster dose after a 2 dose primary series (including the reduced-dosage Moderna booster). The VISION Network analyzed 241,204 ED/UC encounters** and 93,408 hospitalizations across 10 states during August 26, 2021–January 22, 2022. VE after receipt of both 2 and 3 doses was lower during the Omicron-predominant than during the Delta-predominant period at all time points evaluated. During both periods, VE after receipt of a third dose was higher than that after a second dose; however, VE waned with increasing time since vaccination. During the Omicron period, VE against ED/UC visits was 87% during the first 2 months after a third dose and decreased to 66% among those vaccinated 4–5 months earlier; VE against hospitalizations was 91% during the first 2 months following a third dose and decreased to 78% ≥4 months after a third dose. For both Delta- and Omicron-predominant periods, VE was generally higher for protection against hospitalizations than against ED/UC visits. All eligible persons should remain up to date with recommended COVID-19 vaccinations to best protect against COVID-19–associated hospitalizations and ED/UC visits.

VISION Network methods have been previously published (6). Eligible medical encounters were defined as those among adults aged ≥18 years with a COVID-19–like illness diagnosis†† who had received molecular testing (primarily reverse transcription–polymerase chain reaction assay) for SARS-CoV-2, the virus that causes COVID-19, during the 14 days before through 72 hours after the medical encounter. The study period began on August 26, 2021, 14 days after the first U.S. recommendation for a third mRNA COVID-19 vaccine dose.§§ The date when the Omicron variant accounted for ≥50% of sequenced isolates was determined for each study site based on state and national surveillance data. Recipients of Ad.26.COV2.S (Janssen [Johnson & Johnson]) vaccine, 1 or >3 doses of an mRNA vaccine, and those for whom <14 days had elapsed since receipt of any dose were excluded.

VE was estimated using a test-negative design, comparing the odds of a positive SARS-CoV-2 test result between vaccinated and unvaccinated patients using logistic regression models conditioned on calendar week and geographic area and adjusting for age, local virus circulation, immunocompromised status, additional patient comorbidities, and other patient and facility characteristics.¶¶ Immunocompromised status was identified by previously published diagnosis codes.*** Vaccination status was categorized based on the number of vaccine doses received and number of days between receipt of the most recent vaccine dose and the index medical encounter date (referred to as time since vaccination).††† Patients with no record of mRNA vaccination before the index date were considered unvaccinated. Persons categorized as having received 3 doses included those who received a third dose in a primary series or a booster dose after a 2 dose primary series (including the reduced-dosage Moderna booster).

A standardized mean or proportion difference ≥0.2 indicated a nonnegligible difference in distributions of vaccination or infection status. The most remote category of time since vaccination was either ≥4 months or ≥5 months, depending on data availability (no hospitalizations were observed ≥5 months after receipt of a third dose during either period). To test for a trend in waning, time since vaccination categories were specified as an ordinal variable (<2 months = 0; 2–3 months = 1; 4 months = 2; ≥5 months = 3), with statistically significant waning indicated by a p-value <0.05 for the resulting regression coefficient. SAS (version 9.4, SAS Institute) and R software (version 4.1.2, R Foundation) were used to prepare data and perform statistical analysis.

For illustration purposes, the earliest and latest VE estimates for the trend are described. The overall trend can be statistically significant even though the precision of each estimate might be low, with the 95% CIs of estimates including zero. Analyses were stratified by two periods: Delta variant predominance and Omicron variant predominance. This study was reviewed and approved by the institutional review boards at participating sites and under a reliance agreement with the Westat, Inc. Institutional Review Board.§§§

Among 241,204 eligible ED/UC encounters, 185,652 (77%) and 55,552 (23%) occurred during the Delta- and Omicron-predominant periods, respectively (Table 1). Among persons with COVID-19–like illness seeking care at ED/UC facilities, 46% were unvaccinated, 44% had received 2 doses of vaccine, and 10% had received 3 doses. The median interval since receipt of the most recent dose before the ED/UC encounter was 214 days (IQR = 164–259 days) among those who had received 2 doses and 49 days (IQR = 30–73) among those who had received 3 doses (CDC, unpublished data, 2022).

During the Delta-predominant period, VE against laboratory-confirmed COVID-19–associated ED/UC encounters was higher after receipt of a third dose than after a second dose; however, VE declined with increasing time since vaccination (Table 2). Among recipients of 3 doses, VE was 97% within 2 months of vaccination and declined to 89% among those vaccinated ≥4 months earlier (p<0.001 for test of trend in waning VE).

During the Omicron-predominant period, VE against COVID-19–associated ED/UC encounters was lower overall compared with that during the Delta-predominant period and waned after the second dose, from 69% within 2 months of vaccination to 37% at ≥5 months after vaccination (p<0.001). Protection increased after a third dose, with VE of 87% among those vaccinated within the past 2 months; however, VE after 3 doses declined to 66% among those vaccinated 4–5 months earlier and 31% among those vaccinated ≥5 months earlier, although the latter estimate is imprecise because few data were available on persons vaccinated for ≥5 months after a third dose. The decreasing trend of VE with increasing time since vaccination was significant (p<0.001).

Among 93,408 eligible hospitalizations, 83,045 (89%) and 10,363 (11%) occurred during the Delta- and Omicron-predominant periods, respectively (Table 3). Among persons hospitalized with COVID-19–like illness, 43% were unvaccinated, 45% had received 2 vaccine doses, and 12% had received 3 doses. The median interval since receipt of the most recent dose before hospitalization was 216 days (IQR = 175–257 days) among those who had received 2 doses and 46 days (IQR = 29–67 days) among those who had received 3 doses, (CDC, unpublished data, 2022).

During the Delta-predominant period, 2-dose VE against laboratory-confirmed COVID-19–associated hospitalizations declined with increasing time since vaccination and increased after a third dose (Table 2). Among recipients of 3 doses during the Delta-predominant period, VE against COVID-19–associated hospitalizations declined from 96% within 2 months of vaccination to 76% among those vaccinated ≥4 months earlier although the latter estimate is imprecise because few data were available on persons vaccinated for ≥4 months after a third dose during the Delta-predominant period (p<0.001 for test of trend in waning VE).

During the period of Omicron predominance, VE against COVID-19–associated hospitalizations was lower overall and waned with time since vaccination: VE after a second dose declined from 71% within 2 months of vaccination to 54% among those vaccinated ≥5 months earlier (p = 0.01). Among recipients of 3 doses, VE against COVID-19–associated hospitalizations declined from 91% among those vaccinated within the past 2 months to 78% among those vaccinated ≥4 months earlier (p<0.001).

Discussion

In a multistate analysis of 241,204 ED/UC encounters and 93,408 hospitalizations among adults with COVID-19–like illness during August 26, 2021–January 22, 2022, estimates of VE against laboratory-confirmed COVID-19 were lower during the Omicron-predominant than during the Delta-predominant period, after accounting for both number of vaccine doses received and time since vaccination. During both periods, VE after receipt of a third dose was always higher than VE following a second dose; however, VE waned with increasing time since vaccination. During the Omicron-predominant period, mRNA vaccination was highly effective against both COVID-19–associated ED/UC encounters (VE = 87%) and COVID-19 hospitalizations (VE = 91%) within 2 months after a third dose, but effectiveness waned, declining to 66% for prevention of COVID-19–associated ED/UC encounters by the fourth month after receipt of a third dose and to 78% for hospitalizations by the fourth month after receipt of a third dose. The finding of lower VE for 2 or 3 doses during the Omicron-predominant period is consistent with previous reports from the VISION network and others¶¶¶,**** (2,7). Waning of VE after receipt of a third dose of mRNA vaccine has also been observed in Israel (8) and in preliminary reports from the VISION Network (2). This analysis enhances an earlier VISION Network report (2) by extending the Omicron study period to January 22, 2022, providing a more detailed breakdown of time since vaccination, and using an analytic technique that better controls for potential confounding by calendar week and geographic area. By comparing COVID-19 test-positive case-patients with COVID-19 test-negative control patients in the same geographic area and for whom encounter index dates occurred within the same week, bias in VE estimates resulting from temporal and spatial variations in virus circulation and vaccine coverage was reduced.

The findings in this report are subject to at least seven limitations. First, because this study was designed to estimate VE against COVID-19–associated ED/UC visits or hospitalizations, VE estimates from this study do not include COVID-19 infections that were not medically attended. Second, the median interval from receipt of a third dose to medical encounters was 49 days; thus, the observed performance of a third dose is limited to a relatively short period after vaccination. Third, the small number of COVID-19 test-positive patients in the most remote time-since-vaccination groups reduced the precision of the VE estimates for those groups (e.g., ≥5 months). Fourth, variations in waning of VE by age group, immunocompromised status, other indicators of underlying health status, or vaccine product have not yet been examined. This study could not distinguish whether a third dose was received as an additional dose as part of a primary series (as recommended for immunocompromised persons) or as a booster dose after completion of a primary series. Further research should evaluate waning VE of a third primary dose among immunocompromised adults compared with waning of VE after a booster dose among immunocompetent adults. Fifth, despite adjustments to account for differences between unvaccinated and vaccinated persons, VE estimates might have been biased by residual differences between these groups with respect to immunocompromised status and other health conditions, as well as from unmeasured behaviors (e.g., mask use and close contact with persons with COVID-19). For example, insufficient adjustment for immunocompromised status might have biased the estimates of VE downward among persons most remote from receipt of a third dose. Sixth, genetic characterization of patients’ viruses was not available, and analyses relied on dates when the Omicron variant became locally predominant based on surveillance data; therefore, the Omicron period of predominance in this study likely includes some medical encounters associated with the Delta variant. Finally, although the facilities in this study serve heterogeneous populations in 10 states, the findings might not be generalizable to the U.S. population.

These findings underscore the importance of receiving a third dose of mRNA COVID-19 vaccine to prevent both COVID-19–associated ED/UC encounters and COVID-19 hospitalizations among adults. The finding that protection conferred by mRNA vaccines waned in the months after receipt of a third vaccine dose reinforces the importance of further consideration of additional doses to sustain or improve protection against COVID-19–associated ED/UC encounters and COVID-19 hospitalizations. All eligible persons should remain up to date with recommended COVID-19 vaccinations to best protect against COVID-19–associated hospitalizations and ED/UC visits.


1CDC COVID-19 Emergency Response Team; 2School of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado; 3Center for Biomedical Informatics, Regenstrief Institute, Indianapolis, Indiana; 4Fairbanks School of Public Health, Indiana University, Indianapolis, Indiana; 5Westat, Rockville, Maryland; 6HealthPartners Institute, Minneapolis, Minnesota; 7Center for Health Research, Kaiser Permanente Northwest, Portland, Oregon; 8Kaiser Permanente Vaccine Study Center, Kaiser Permanente Northern California Division of Research, Oakland, California; 9Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, New York; 10New York Presbyterian Hospital, New York, New York; 11Division of Infectious Diseases and Clinical Epidemiology, Intermountain Healthcare, Salt Lake City, Utah; 12Indiana University School of Medicine, Indianapolis, Indiana; 13Vanderbilt University Medical Center, Nashville, Tennessee; 14Baylor Scott & White Health, Temple, Texas; 15Children’s Minnesota, Minneapolis, Minnesota; 16Texas A&M University College of Medicine, Temple, Texas.


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TABLE 1. Characteristics of emergency department and urgent care encounters among adults with COVID-19–like illness,* by mRNA COVID-19 vaccination status and SARS-CoV-2 test result — 10 states,§ August 2021–January 2022Return to your place in the text
Characteristic Total no. (column %) mRNA COVID-19 vaccination status
no. (row %)
SMD†† SARS-CoV-2 test result
no. (row %)
SMD††
Unvaccinated Vaccinated (2 doses) Vaccinated (3 doses)** Negative Positive
All ED/UC encounters 241,204 (100) 110,873 (46) 105,193 (44) 25,138 (10) 179,378 (74) 61,826 (26)
Variant predominance period
B.1.617.2 (Delta) 185,652 (77) 86,074 (46) 85,371 (46) 14,207 (8) 0.27 148,106 (80) 37,546 (20) 0.50
B.1.1.529 (Omicron) 55,552 (23) 24,799 (45) 19,822 (36) 10,931 (20) 31,272 (56) 24,280 (44)
Site
Baylor Scott & White Health 40,621 (17) 23,827 (59) 14,438 (36) 2,356 (6) 0.70 28,701 (71) 11,920 (29) 0.40
Columbia University§§ 5,681 (2) 3,039 (53) 2,388 (42) 254 (4) 4,025 (71) 1,656 (29)
HealthPartners§§ 4,893 (2) 1,352 (28) 3,270 (67) 271 (6) 4,109 (84) 784 (16)
Intermountain Healthcare 61,333 (25) 25,072 (41) 29,407 (48) 6,854 (11) 50,637 (83) 10,696 (17)
Kaiser Permanente Northern California 45,753 (19) 11,165 (24) 25,335 (55) 9,253 (20) 34,715 (76) 11,038 (24)
Kaiser Permanente Northwest 16,625 (7) 5,895 (35) 8,620 (52) 2,110 (13) 13,561 (82) 3,064 (18)
Regenstrief Institute 41,694 (17) 26,799 (64) 12,541 (30) 2,354 (6) 25,420 (61) 16,274 (39)
University of Colorado 24,604 (10) 13,724 (56) 9,194 (37) 1,686 (7) 18,210 (74) 6,394 (26)
Age group, yrs
18–44 110,203 (46) 65,073 (59) 40,936 (37) 4,194 (4) 0.81 80,085 (73) 30,118 (27) 0.23
45–64 64,583 (27) 28,479 (44) 30,272 (47) 5,832 (9) 45,710 (71) 18,873 (29)
65–74 31,172 (13) 9,390 (30) 15,289 (49) 6,493 (21) 24,304 (78) 6,868 (22)
75–84 23,242 (10) 5,360 (23) 12,160 (52) 5,722 (25) 19,155 (82) 4,087 (18)
≥85 12,004 (5) 2,571 (21) 6,536 (54) 2,897 (24) 10,124 (84) 1,880 (16)
Sex
Male¶¶ 97,859 (41) 47,368 (48) 40,062 (41) 10,429 (11) 0.06 70,430 (72) 27,429 (28) 0.10
Female 143,345 (59) 63,505 (44) 65,131 (45) 14,709 (10) 108,948 (76) 34,397 (24)
Race/Ethnicity
White, non-Hispanic 150,419 (62) 65,355 (43) 67,433 (45) 17,631 (12) 0.30 116,134 (77) 34,285 (23) 0.22
Hispanic 37,043 (15) 18,238 (49) 16,054 (43) 2,751 (7) 26,148 (71) 10,895 (29)
Black, non-Hispanic 24,702 (10) 14,633 (59) 8,653 (35) 1,416 (6) 16,534 (67) 8,168 (33)
Other, non-Hispanic*** 17,683 (7) 6,153 (35) 9,009 (51) 2,521 (14) 13,360 (76) 4,323 (24)
Unknown 11,357 (5) 6,494 (57) 4,044 (36) 819 (7) 7,202 (63) 4,155 (37)
Chronic respiratory condition†††
Yes¶¶ 42,531 (18) 17,884 (42) 19,359 (46) 5,288 (12) 0.09 35,264 (83) 7,267 (17) 0.22
No 198,673 (82) 92,989 (47) 85,834 (43) 19,850 (10) 144,114 (73) 54,559 (27)
Chronic nonrespiratory condition§§§
Yes¶¶ 62,192 (26) 24,884 (40) 29,202 (47) 8,106 (13) 0.17 50,304 (81) 11,888 (19) 0.21
No 179,012 (74) 85,989 (48) 75,991 (42) 17,032 (10) 129,074 (72) 49,938 (28)
Immunocompromised status¶¶¶
Yes¶¶ 9,546 (4) 3,348 (35) 4,462 (47) 1,736 (18) 0.12 8,222 (86) 1,324 (14) 0.14
No 231,658 (96) 107,525 (46) 100,731 (43) 23,402 (10) 171,156 (74) 60,502 (26)
Total vaccinated 130,331 (54) 105,193 (81) 25,138 (19) 111,559 (86) 18,772 (14)
Vaccine product
Pfizer-BioNTech 79,806 (61) 63,912 (80) 15,894 (20) 67,179 (84) 12,627 (16) 0.15
Moderna 48,990 (38) 41,046 (84) 7,944 (16) 42,980 (88) 6,010 (12)
Combination of mRNA products 1,535 (1) 235 (15) 1,300 (85) 1,400 (91) 135 (9)
No. of doses received (interval from receipt of most recent dose to ED/UC encounter)
2 (<2 mos) 4,808 (4) 4,808 (100) 4,507 (94) 301 (6) 0.38
2 (2–3 mos) 10,644 (8) 10,644 (100) 9,332 (88) 1,312 (12)
2 (4 mos) 10,175 (8) 10,175 (100) 8,945 (88) 1,230 (12)
2 (≥5 mos) 79,566 (61) 79,566 (100) 65,922 (83) 13,644 (17)
3 (<2 mos) 15,614 (12) 15,614 (100) 14,694 (94) 920 (6)
3 (2–3 mos) 8,759 (7) 8,759 (100) 7,639 (87) 1,120 (13)
3 (4 mos) 736 (1) 736 (100) 509 (69) 227 (31)
3 (≥5 mos) 29 (0) 29 (100) 11 (38) 18 (62)

Abbreviations: ED = emergency department; ICD-9 = International Classification of Diseases, Ninth Revision; ICD-10 = International Classification of Diseases, Tenth Revision SMD = standardized mean or proportion difference; UC = urgent care.
* Medical events with a discharge code consistent with COVID-19–like illness were included. COVID-19–like illness diagnoses included acute respiratory illness (e.g., COVID-19, respiratory failure, or pneumonia) or related signs or symptoms (cough, fever, dyspnea, vomiting, or diarrhea) using ICD-9 and ICD-10 diagnosis codes. Clinician-ordered molecular assays (e.g., real-time reverse transcription–polymerase chain reaction) for SARS-CoV-2 occurring ≤14 days before to <72 hours after admission were included. Recipients of Janssen vaccine, 1 or >3 doses of an mRNA vaccine, and those for whom 1–13 days had elapsed since receipt of any dose were excluded.
Vaccination was defined as having received the listed number of doses of an mRNA-based COVID-19 vaccine ≥14 days before the medical event index date, which was the date of respiratory specimen collection associated with the most recent positive or negative SARS-CoV-2 test result before medical event or the admission date if testing only occurred after the admission.
§ California, Colorado, Indiana, Minnesota, New York, Oregon, Texas, Utah, Washington, and Wisconsin.
Partners contributing data on medical events and estimated date of Omicron predominance were in California (December 21), Colorado (December 19), Indiana (December 26), Minnesota and Wisconsin (December 25), New York (December 18), Oregon (December 24), Texas (December 16), Utah (December 24), and Washington (December 24). The study period began in September 2021 for partners located in Texas.
** The ”Vaccinated (3 doses)” category includes persons who have received a third dose in their primary series or have received a booster dose following their 2-dose primary series; the third dose could have been either a 100-μg or 50-μg dose of Moderna vaccine or a 30-μg dose of the Pfizer-BioNTech vaccine.
†† An absolute SMD ≥0.20 indicates a nonnegligible difference in variable distributions between medical events for vaccinated versus unvaccinated patients. When calculating SMDs for differences in characteristics across mRNA COVID-19 vaccination status, the SMD was calculated as the average of the absolute value of the SMD for unvaccinated versus vaccinated with 2 doses and the absolute value of the SMD for unvaccinated versus vaccinated with 3 doses. All SMDs are reported as the absolute SMD.
§§ ED data at Columbia University Irving Medical Center and HealthPartners exclude encounters that were transferred to an inpatient setting
¶¶ Referent group used for SMD calculations for dichotomous variables.
*** Other race includes Asian, Native Hawaiian or other Pacific islander, American Indian or Alaska Native, Other not listed, and multiple races.
††† Chronic respiratory condition was defined using ICD-9 and ICD-10 as the presence of discharge codes for asthma, chronic obstructive pulmonary disease, or other lung disease.
§§§ Chronic nonrespiratory condition was defined using ICD-9 and ICD-10 as the presence of discharge codes for heart failure, ischemic heart disease, hypertension, other heart disease, stroke, other cerebrovascular disease, diabetes type I or II, other diabetes, metabolic disease, clinical obesity, clinically underweight, renal disease, liver disease, blood disorder, immunosuppression, organ transplant, cancer, dementia, neurologic disorder, musculoskeletal disorder, or Down syndrome.
¶¶¶ Immunocompromised status was defined using ICD-9 and ICD-10 as the presence of discharge codes for solid malignancy, hematologic malignancy, rheumatologic or inflammatory disorder, other intrinsic immune condition or immunodeficiency, or organ or stem cell transplant.

TABLE 2. mRNA COVID-19 vaccine effectiveness* against laboratory-confirmed COVID-19–associated emergency department and urgent care encounters and hospitalizations among adults aged ≥18 years, by number and timing of vaccine doses§ — VISION Network, 10 states, August 2021–January 2022**Return to your place in the text
Characteristic Total SARS-CoV-2 positive test result
no. (%)
VE fully adjusted
% (95% CI)*
Waning trend p value††
ED/UC encounters
Overall
Unvaccinated (Ref) 110,873 43,054 (39)
Any mRNA vaccine, 2 doses 105,193 16,487 (16) 72 (72–73) <0.001
<2 mos 4,808 301 (6) 88 (87–90)
2–3 mos 10,644 1,312 (12) 80 (78–81)
4 mos 10,175 1,230 (12) 79 (77–80)
≥5 mos 79,566 13,644 (17) 69 (68–70)
Any mRNA vaccine, 3 doses 25,138 2,285 (9) 89 (89–90) <0.001
<2 mos 15,614 920 (6) 92 (91–93)
2–3 mos 8,759 1,120 (13) 86 (85–87)
4 mos 736 227 (31) 75 (70–79)
≥5 mos 29 18 (62) 50 (-7–77)
Delta-predominant period
Unvaccinated (Ref) 86,074 29,063 (34)
Any mRNA vaccine, 2 doses 85,371 8,136 (10) 80 (79–81) <0.001
<2 mos 4,253 144 (3) 92 (91–94)
2–3 mos 8,662 527 (6) 88 (86–89)
4 mos 8,941 721 (8) 85 (83–86)
≥5 mos 63,515 6,744 (11) 77 (76–78)
Any mRNA vaccine, 3 doses 14,207 347 (2) 96 (95–96) <0.001
<2 mos 10,621 210 (2) 97 (96–97)
2–3 mos 3,542 134 (4) 93 (92–94)
≥4 mos 44 3 (7) 89 (64–97)
Omicron-predominant period
Unvaccinated (Ref) 24,799 13,991 (56)
Any mRNA vaccine, 2 doses 19,822 8,351 (42) 41 (38–43) <0.001
<2 mos 555 157 (28) 69 (62–75)
2–3 mos 1,982 785 (40) 50 (45–55)
4 mos 1,234 509 (41) 48 (41–54)
≥5 mos 16,051 6,900 (43) 37 (34–40)
Any mRNA vaccine, 3 doses 10,931 1,938 (18) 83 (82–84) <0.001
<2 mos 4,993 710 (14) 87 (85–88)
2–3 mos 5,217 986 (19) 81 (79–82)
4 mos 692 224 (32) 66 (59–71)
≥5 mos 29 18 (62) 31 (−50–68)
Hospitalizations
Overall
Unvaccinated (Ref) 40,125 16,335 (41)
Any mRNA vaccine, 2 doses 42,326 4,294 (10) 82 (81–83) <0.001
<2 mos 1,662 71 (4) 93 (91–94)
2–3 mos 3,084 223 (7) 88 (86–90)
4 mos 3,279 234 (7) 89 (87–90)
≥5 mos 34,301 3,766 (11) 80 (79–81)
Any mRNA vaccine, 3 doses 10,957 471 (4) 93 (92–94) <0.001
<2 mos 7,332 221 (3) 95 (94–95)
2–3 mos 3,413 211 (6) 91 (89–92)
≥4 mos 212 39 (18) 81 (72–87)
Delta-predominant period
Unvaccinated (Ref) 36,214 14,445 (40)
Any mRNA vaccine, 2 doses 38,707 3,315 (9) 85 (84–85) <0.001
<2 mos 1,574 49 (3) 94 (92–96)
2–3 mos 2,790 154 (6) 91 (89–92)
4 mos 3,129 192 (6) 90 (89–92)
≥5 mos 31,214 2,920 (9) 82 (82–83)
Any mRNA vaccine, 3 doses 8,124 195 (2) 95 (95–96) <0.001
<2 mos 6,071 118 (2) 96 (95–97)
2–3 mos 2,030 74 (4) 93 (91–95)
≥4 mos 23 3 (13) 76 (14–93)
Omicron-predominant period
Unvaccinated (Ref) 3,911 1,890 (48)
Any mRNA vaccine, 2 doses 3,619 979 (27) 55 (50–60) 0.01
<2 mos 88 22 (25) 71 (51–83)
2–3 mos 294 69 (23) 65 (53–74)
4 mos 150 42 (28) 58 (38–71)
≥5 mos 3,087 846 (27) 54 (48–59)
Any mRNA vaccine, 3 doses 2,833 276 (10) 88 (86–90) <0.001
<2 mos 1,261 103 (8) 91 (88–93)
2–3 mos 1,383 137 (10) 88 (85–90)
≥4 mos 189 36 (19) 78 (67–85)

Abbreviations: ED = emergency department; ICD-9 = International Classification of Diseases, Ninth Revision; ICD-10 = International Classification of Diseases, Tenth Revision; Ref = referent group; UC = urgent care; VE = vaccine effectiveness.
* VE was calculated as [1 − odds ratio] x 100%, estimated using a test-negative design, conditioned on calendar week and geographic area, and adjusted for age, local virus circulation (percentage of SARS-CoV-2–positive results from testing within the counties surrounding the facility on the date of the encounter), propensity to be vaccinated (calculated separately for each VE estimate), and other factors. Generalized boosted regression tree methods were used to estimate the propensity to be vaccinated based on sociodemographic characteristics, underlying medical conditions, and facility characteristics.
Medical events with a discharge code consistent with COVID-19–like illness were included. COVID-19–like illness diagnoses included acute respiratory illness (e.g., COVID-19, respiratory failure, or pneumonia) or related signs or symptoms (cough, fever, dyspnea, vomiting, or diarrhea) using ICD-9 and ICD-10 diagnosis codes. Clinician-ordered molecular assays (e.g., real-time reverse transcription–polymerase chain reaction) for SARS-CoV-2 occurring ≤14 days before to <72 hours after admission were included. Recipients of Janssen vaccine, 1 or >3 doses of an mRNA vaccine, and those for whom <14 days had elapsed since receipt of any dose were excluded.
§ Vaccination status was documented in electronic health records and immunization registries and was defined as having received the listed number of doses of an mRNA-based COVID-19 vaccine ≥14 days before the medical event index date. Index date was defined as the date of respiratory specimen collection associated with the most recent positive or negative SARS-CoV-2 test result before the medical event or the admission date if testing only occurred after the admission. Persons categorized as having received 3 vaccine doses include those who received a third dose in their primary series or received a booster dose after their 2 dose primary series; the third dose could have been either a 100-μg or 50-μg dose of Moderna vaccine or a 30-μg dose of the Pfizer-BioNTech vaccine.
California, Colorado, Indiana, Minnesota, New York, Oregon, Texas, Utah, Washington, and Wisconsin.
** Partners contributing data on medical events and estimated dates of Omicron predominance were in California (December 21), Colorado (December 19), Indiana (December 26), Minnesota and Wisconsin (December 25), New York (December 18), Oregon (December 24), Texas (December 16), Utah (December 24), and Washington (December 24). The study period began in September 2021 for partners located in Texas.
†† p-value for test of linear trendline fitted to VE estimates across ordinal categories of time since vaccination (<2 months = 0; 2–3 months = 1, 4 months = 2, ≥5 months = 3).

TABLE 3. Characteristics of hospitalizations among adults with COVID-19–like illness,* by mRNA COVID-19 vaccination status and SARS-CoV-2 test result — 10 states,§ August 2021-January 2022Return to your place in the text
Characteristic Total no. (column %) mRNA COVID-19 vaccination status,
no. (row %)
SMD†† SARS-CoV-2 test result,
no. (row %)
SMD††
Unvaccinated Vaccinated (2 doses) Vaccinated (3 doses)** Negative Positive
All hospitalizations 93,408 (100) 40,125 (43) 42,326 (45) 10,957 (12) 72,308 (77) 21,100 (23)
Variant predominance period
B.1.617.2 (Delta) 83,045 (89) 36,214 (44) 38,707 (47) 8,124 (10) 0.24 65,090 (78) 17,955 (22) 0.15
B.1.1.529 (Omicron) 10,363 (11) 3,911 (38) 3,619 (35) 2,833 (27) 7,218 (70) 3,145 (30)
Site
Baylor Scott & White Health 17,110 (18) 8,688 (51) 7,182 (42) 1,240 (7) 0.67 13,772 (80) 3,338 (20) 0.43
Columbia University 3,491 (4) 1,494 (43) 1,723 (49) 274 (8) 2,908 (83) 583 (17)
HealthPartners 1,096 (1) 253 (23) 777 (71) 66 (6) 966 (88) 130 (12)
Intermountain Healthcare 8,070 (9) 3,741 (46) 3,299 (41) 1,030 (13) 5,643 (70) 2,427 (30)
Kaiser Permanente Northern California 23,236 (25) 4,967 (21) 13,264 (57) 5,005 (22) 19,952 (86) 3,284 (14)
Kaiser Permanente Northwest 4,170 (5) 1,702 (41) 1,988 (48) 480 (12) 3,371 (81) 799 (19)
Regenstrief Institute 25,131 (27) 13,891 (55) 9,415 (37) 1,825 (7) 16,897 (67) 8,234 (33)
University of Colorado 11,104 (12) 5,389 (49) 4,678 (42) 1,037 (9) 8,799 (79) 2,305 (21)
Age group, yrs
18–44 17,919 (19) 11,649 (65) 5,550 (31) 720 (4) 0.75 12,998 (73) 4,921 (27) 0.32
45–64 25,620 (27) 13,426 (52) 10,470 (41) 1,724 (7) 18,278 (71) 7,342 (29)
65–74 20,947 (22) 7,369 (35) 10,471 (50) 3,107 (15) 16,775 (80) 4,172 (20)
75–84 18,316 (20) 5,003 (27) 9,874 (54) 3,439 (19) 15,215 (83) 3,101 (17)
≥85 10,606 (11) 2,678 (25) 5,961 (56) 1,967 (19) 9,042 (85) 1,564 (15)
Sex
Male§§ 42,175 (45) 18,619 (44) 18,465 (44) 5,091 (12) 0.03 31,609 (75) 10,566 (25) 0.13
Female 51,233 (55) 21,506 (42) 23,861 (47) 5,866 (11) 40,699 (79) 10,534 (21)
Race/Ethnicity
White, non-Hispanic 60,285 (65) 24,582 (41) 27,842 (46) 7,861 (13) 0.28 47,171 (78) 13,114 (22) 0.16
Hispanic 11,752 (13) 5,559 (47) 5,194 (44) 999 (9) 8,680 (74) 3,072 (26)
Black, non-Hispanic 10,360 (11) 5,447 (53) 4,200 (41) 713 (7) 8,077 (78) 2,283 (22)
Other, non-Hispanic¶¶ 7,199 (8) 2,379 (33) 3,722 (52) 1,098 (15) 5,845 (81) 1,354 (19)
Unknown 3,812 (4) 2,158 (57) 1,368 (36) 286 (8) 2,535 (67) 1,277 (33)
Chronic respiratory condition***
Yes§§ 59,525 (64) 24,741 (42) 27,360 (46) 7,424 (12) 0.10 46,548 (78) 12,977 (22) 0.06
No 33,883 (36) 15,384 (45) 14,966 (44) 3,533 (10) 25,760 (76) 8,123 (24)
Chronic nonrespiratory condition†††
Yes§§ 79,433 (85) 31,480 (40) 37,798 (48) 10,155 (13) 0.36 63,475 (80) 15,958 (20) 0.32
No 13,975 (15) 8,645 (62) 4,528 (32) 802 (6) 8,833 (63) 5,142 (37)
Immunocompromised status§§§
Yes§§ 19,401 (21) 5,988 (31) 9,755 (50) 3,658 (19) 0.33 16,969 (87) 2,432 (13) 0.32
No 74,007 (79) 34,137 (46) 32,571 (44) 7,299 (10) 55,339 (75) 18,668 (25)
Total vaccinated 53,283 (57) 42,326 (79) 10,957 (21) 48,518 (91) 4,765 (9)
Vaccine product
Pfizer-BioNTech 31,460 (59) 24,382 (78) 7,078 (22) 28,339 (90) 3,121 (10) 0.15
Moderna 21,349 (40) 17,850 (84) 3,499 (16) 19,731 (92) 1,618 (8)
Combination of mRNA products 474 (1) 94 (20) 380 (80) 448 (95) 26 (5)
No. of doses received (interval from receipt of most recent dose to hospitalization)
2 (<2 mos) 1,662 (3) 1,662 (100) 1,591 (96) 71 (4) 0.42
2 (2–3 mos) 3,084 (6) 3,084 (100) 2,861 (93) 223 (7)
2 (4 mos) 3,279 (6) 3,279 (100) 3,045 (93) 234 (7)
2 (≥5 mos) 34,301 (64) 34,301 (100) 30,535 (89) 3,766 (11)
3 (<2 mos) 7,332 (14) 7,332 (100) 7,111 (97) 221 (3)
3 (2–3 mos) 3,413 (6) 3,413 (100) 3,202 (94) 211 (6)
3 (≥4 mos) 212 (0) 212 (100) 173 (82) 39 (18)

Abbreviations: ICD-9 = International Classification of Diseases, Ninth Revision; ICD-10 = International Classification of Diseases, Tenth Revision; SMD = standardized mean or proportion difference.
* Medical events with a discharge code consistent with COVID-19–like illness were included. COVID-19–like illness diagnoses included acute respiratory illness (e.g., COVID-19, respiratory failure, or pneumonia) or related signs or symptoms (cough, fever, dyspnea, vomiting, or diarrhea) using ICD-9 and ICD-10 diagnosis codes. Clinician-ordered molecular assays (e.g., real-time reverse transcription–polymerase chain reaction) for SARS-CoV-2 occurring ≤14 days before to <72 hours after admission were included. Recipients of Janssen vaccine, 1 or >3 doses of an mRNA vaccine, and those for whom 1–13 days had elapsed since receipt of any dose were excluded.
Vaccination was defined as having received the listed number of doses of an mRNA-based COVID-19 vaccine ≥14 days before the medical event index date, which was the date of respiratory specimen collection associated with the most recent positive or negative SARS-CoV-2 test result before medical event or the admission date if testing only occurred after the admission.
§ California, Colorado, Indiana, Minnesota, New York, Oregon, Texas, Utah, Washington, and Wisconsin.
Partners contributing data on medical events and estimated date of Omicron predominance were in California (December 21), Colorado (December 19), Indiana (December 26), Minnesota and Wisconsin (December 25), New York (December 18), Oregon (December 24), Texas (December 16), Utah (December 24), and Washington (December 24). The study period began in September 2021 for partners located in Texas.
** Persons categorized as having received 3 vaccine doses include those who have received a third dose in their primary series or have received a booster dose following their 2-dose primary series; the third dose could have been either a 100-μg or 50-μg dose of Moderna vaccine or a 30-μg dose of the Pfizer-BioNTech vaccine.
†† An absolute SMD ≥0.20 indicates a nonnegligible difference in variable distributions between medical events for vaccinated versus unvaccinated patients. When calculating SMDs for differences of characteristics across mRNA COVID-19 vaccination status, the SMD was calculated as the average of the absolute value of the SMD for unvaccinated versus vaccinated with 2 doses and the absolute value of the SMD for unvaccinated versus vaccinated with 3 doses. All SMDs are reported as the absolute SMD.
§§ Indicates the referent group used for SMD calculations for dichotomous variables.
¶¶ Other race includes Asian, Native Hawaiian or other Pacific islander, American Indian or Alaska Native, Other not listed, and multiple races.
*** Chronic respiratory condition was defined using ICD-9 and ICD-10 as the presence of discharge codes for asthma, chronic obstructive pulmonary disease, or other lung disease.
††† Chronic nonrespiratory condition was defined using ICD-9 and ICD-10 as the presence of discharge codes for heart failure, ischemic heart disease, hypertension, other heart disease, stroke, other cerebrovascular disease, diabetes type I or II, other diabetes, metabolic disease, clinical obesity, clinically underweight, renal disease, liver disease, blood disorder, immunosuppression, organ transplant, cancer, dementia, neurologic disorder, musculoskeletal disorder, or Down syndrome.
§§§ Immunocompromised status was defined using ICD-9 and ICD-10 as the presence of discharge codes for solid malignancy, hematologic malignancy, rheumatologic or inflammatory disorder, other intrinsic immune condition or immunodeficiency, or organ or stem cell transplant.


Suggested citation for this article: Ferdinands JM, Rao S, Dixon BE, et al. Waning 2-Dose and 3-Dose Effectiveness of mRNA Vaccines Against COVID-19–Associated Emergency Department and Urgent Care Encounters and Hospitalizations Among Adults During Periods of Delta and Omicron Variant Predominance — VISION Network, 10 States, August 2021–January 2022. MMWR Morb Mortal Wkly Rep. ePub: 11 February 2022. DOI: http://dx.doi.org/10.15585/mmwr.mm7107e2external icon.

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